chr22_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

33.0

E-value:

0.0011

From sequence:

211774

To sequence:

211695

Alignments:

                                  vvvv v           v      v        v vvvv                             NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<______>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuUacagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG:+GGGGGG::G     G  CA:::A: AA +        ::::UG CCCC  C::CCCCCC :CCCCC  UU+++   +
    chr22 211774 AGGGGGGGGGGGGGGGU----GCCCAAAAAAUAAAACACCCCGUUUUUUGCCCCCGGCCCCCCCCCACCCCCCAAUUUUUCCCC 211695
                 ******99999998765....9999999999999777777677788888888888899999999999***************** PP

>>

RNAfold
>chr22_9
GGGGGAAAAAUUGGGGGGUGGGGGGGGGCCGGGGGCAAAAAACGGGGUGU
UUUAUUUUUUGGGCACCCCCCCCCCCCCCCUCU
............((((((.(((((((((((.((((...(((((.....)))))...)))).))).)))))))))))))).... (-46.50)

Length sequence

: 83

Length match:

78