chr23_20

cmsearch-Rfam

Family :

TB6Cs1H3

Id:

RF01547

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01547

Description:

not description

Score:

85.6

E-value:

4.6e-18

From sequence:

762932

To sequence:

762869

Alignments:

                                                                                  NC
                 :<<<<<<<------<<<<<--<<<<<________>>>>>--->>>>>------>>>>>>>:::: CS
  RF01547      1 ACCgcGGGUuGCACCGuUGCGGggCACGaCucAUUGccCuauCGgCGGACUUGCCCgcGGGAGA 64    
                 ACC::G:GU+GCACCGUUGCGG::CACG C+CAUUG::CUAUCGGCGGACUUGC:C::GGGAGA
    chr23 762932 ACCAGGAGUAGCACCGUUGCGGAACACGGCCCAUUGAUCUAUCGGCGGACUUGCUCUUGGGAGA 762869
                 **************************************************************** PP

>>

RNAfold
>chr23_20
CUCCCAAGAGCAAGUCCGCCGAUAGAUCAAUGGGCCGUGUUCCGCAACGG
UGCUACUCCUGGU
...(((.(((...(((........)))....(.(((((........))))).)..))).))). (-12.70)

Length sequence

: 63

Length match:

62