chr23_27

cmsearch-Rfam

Family :

TB6Cs1H4

Id:

RF01548

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01548

Description:

not description

Score:

89.6

E-value:

4.3e-19

From sequence:

762830

To sequence:

762755

Alignments:

                                                                                               NC
                 :<<<<<<---------<<<<----<<<<<_...____.________>>>>>------>>>>------>>>>>>:::: CS
  RF01548      1 CgCCuCgucAUUaAAGgUCCCUUGGcggCu...aUAU.cuaUCGAUGccgCUUCACAGGAuACCCAucGaGGcuAGA 73    
                 CGCC:CG CAUU+AAGGUCCCUUGGC:GC+   AUAU C++UCGAUGC:GCUUCACAGGAUACCCA+CG:GGC+AGA
    chr23 762830 CGCCGCG-CAUUCAAGGUCCCUUGGCGGCGauuAUAUaCCCUCGAUGCUGCUUCACAGGAUACCCAGCGUGGCCAGA 762755
                 *******.**********************9999999**************************************** PP

>>

RNAfold
>chr23_27
CUGGCCACGCUGGGUAUCCUGUGAAGCAGCAUCGAGGGUAUAUAAUCGCC
GCCAAGGGACCUUGAAUGCGCGGCG
(((((...)))))((((((((((......)))..))))))).....((((((((((....)))).....)))))) (-22.20)

Length sequence

: 75

Length match:

74