chr23_32

cmsearch-Rfam

Family :

TB8Cs3H1

Id:

RF01550

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01550

Description:

not description

Score:

82.0

E-value:

2.1e-18

From sequence:

40427

To sequence:

40489

Alignments:

                   v                                                 v          NC
                :<<<<<<------<<<<<<<-<<<_______>>>->>->>>>>------->>>>>>::::::: CS
  RF01550     1 AUGgGGuUCGAAUGCGCcgGucgaaacugGUucgCCcUgGCGUGGGAAACgCCcCAAAGAagc 63   
                AUG GG:UCGAAUGCGC:GGUC:A ACUGGUU:GCCC :GCGUGGGAAAC:CC CAAAGA+G+
    chr23 40427 AUGAGGCUCGAAUGCGCUGGUCAAGACUGGUUUGCCCGAGCGUGGGAAACGCCCCAAAGAGGU 40489
                *************************************************************** PP

RNAfold
>chr23_32
UGAGGCUCGAAUGCGCUGGUCAAGACUGGUUUGCCCGAGCGUGGGAAACG
CCCCAAAGAGGU
....(((((...((((((((....))))))..)).))))).((((......))))....... (-18.10)

Length sequence

: 62

Length match:

61