chr23_45

cmsearch-Rfam

Family :

TB9Cs1H1

Id:

RF01861

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01861

Description:

not description

Score:

78.7

E-value:

6.7e-16

From sequence:

765287

To sequence:

765222

Alignments:

                                                                                    NC
                 :<<<<<<--------<<<<<_________...____________>>>>>------->>>>>>:::: CS
  RF01861      1 AGCgCAGaauAuGAAaCCaGUucuuGCgu...AcuuGUGCUGCgCuGGuGCCGAaACUGcGCaAGA 63    
                  GCGCAG++UA+GAAACCAGU+C+UGCGU   ACUUGUGCUGCGCUGGUGCCGAA CUGCGCAAGA
    chr23 765287 CGCGCAGUCUAGGAAACCAGUGCAUGCGUgagACUUGUGCUGCGCUGGUGCCGAAGCUGCGCAAGA 765222
                 ********************************9********************************* PP

>>

RNAfold
>chr23_45
CUUGCGCAGCUUCGGCACCAGCGCAGCACAAGUCUCACGCAUGCACUGGU
UUCCUAGACUGCGCG
...((((((((..((.(((((.(((((...........)).))).))))).))..)).)))))). (-26.60)

Length sequence

: 65

Length match:

64