chr23_47

cmsearch-Rfam

Family :

TB9Cs1H2

Id:

RF01552

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01552

Description:

not description

Score:

108.6

E-value:

6.2e-21

From sequence:

756092

To sequence:

756007

Alignments:

                                                                                                        NC
                 ::<<<-<<------<<<______________________________________________>>>------->>->>>::::::: CS
  RF01552      1 aACGGGGCAAUCCGAGGUgcacGUGgcuUGcgcCcGCUCGCGGGaCUcuGUGCCGuGGuGcgaCCUUCUGGUAGCuCCGGAGAgcC 86    
                 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGG+CUC GUGCCGUGGUGCG+CCUUCUGGUAGC+CCGGAGAGCC
    chr23 756092 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGGGCUCGGUGCCGUGGUGCGGCCUUCUGGUAGCACCGGAGAGCC 756007
                 ************************************************************************************** PP

>>

RNAfold
>chr23_47
GCUCUCCGGUGCUACCAGAAGGCCGCACCACGGCACCGAGCCCCGCGAGC
GGGCGCAAGCCACGUGCACCUCGGAUUGCCCCGUU
.......(((((..((....))..)))))..(((((((((....((..((((((....))).)))))..)))))..))))..... (-31.20)

Length sequence

: 85

Length match:

84