chr23_51

cmsearch-Rfam

Family :

TB9Cs1H2

Id:

RF01552

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01552

Description:

not description

Score:

108.6

E-value:

6.2e-21

From sequence:

762425

To sequence:

762340

Alignments:

                                                                                                        NC
                 ::<<<-<<------<<<______________________________________________>>>------->>->>>::::::: CS
  RF01552      1 aACGGGGCAAUCCGAGGUgcacGUGgcuUGcgcCcGCUCGCGGGaCUcuGUGCCGuGGuGcgaCCUUCUGGUAGCuCCGGAGAgcC 86    
                 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGG+CUC GUGCCGUGGUGCG+CCUUCUGGUAGC+CCGGAGAGCC
    chr23 762425 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGGGCUCGGUGCCGUGGUGCGGCCUUCUGGUAGCACCGGAGAGCC 762340
                 ************************************************************************************** PP

RNAfold
>chr23_51
GCUCUCCGGUGCUACCAGAAGGCCGCACCACGGCACCGAGCCCCGCGAGC
GGGCGCAAGCCACGUGCACCUCGGAUUGCCCCGUU
.......(((((..((....))..)))))..(((((((((....((..((((((....))).)))))..)))))..))))..... (-31.20)

Length sequence

: 85

Length match:

84