chr23_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.2

E-value:

0.0033

From sequence:

754926

To sequence:

755070

Alignments:

                   v                v v  v                         v v v                v              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<_~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAgu*[ 5]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G  G:+G:GGGG:AG:G: G C  A:G:AG AA:+      :+ C:C:U+G C :C:CU:CCCC:CC:C  CC +U+CC+   +
    chr23 754926 AGAGGGGGGGGGGGAGGGACGGC--AAGAAGGAAAA*[68]*UUCCUCUUUGGCUUCUCUCCCCCUCCCCUCCCCUUCCCUUCCC 755070
                 *******************9999..67777777654...*..6678888888999****************************** PP

>>

RNAfold
>chr23_7
GAGGGGGGGGGGGAGGGACGGCAAGAAGGAAAAGGUGGUGGCGGACCAGG
GGCAACCUUGAUGUGCUCACCCACCCACACACACACACAUUCUCUCUCUC
CUUCCUCUUUGGCUUCUCUCCCCCUCCCCUCCCCUUCCCUUCCC
..((((((((((((((((.(.((((.(((((..((((((((((.(.(((((....))))).).))).)).)))))..........................))))).)))).).)))))))))))))))).............. (-64.20)

Length sequence

: 144

Length match:

143