chr24_11

cmsearch-Rfam

Family :

mir-558

Id:

RF01021

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01021

Description:

not description

Score:

33.8

E-value:

0.00037

From sequence:

138748

To sequence:

138849

Alignments:

                                     v                v                   v               v                  NC
                 ::::::::<<-<<<-<<<<<<-<<<<<<<<<<<<<<<<<<--<<-~~~~~~>>-->>>>>>>>>>>>>>>>>>>>>>>...>->>>->>:: CS
  RF01021      1 gUGUGUGUGcGcguguGuGguUauuuuGGuacaGcaGCuCUAGaC*[12]*uCCUGaGCugCuguaCCaaaauacCaC...aAacgGgCUG 94    
                 GUGUGUGUG:G:GUGUG G: U:U:U :GU::::::G :CU ::C      ::C G: C::::::AC: A:A: :C C   AAAC: :CU 
    chr24 138748 GUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCUUCGC*[18]*CGCAGCUCACACACACAUACAC-ACGCgagAAACAUACUU 138849
                 ***************988777777777777777777777766664...9..6666666666666666666665.455511167******** PP

>>

RNAfold
>chr24_11
UGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCUUCGCGCCCGC
UCUACUUACUGGCGCAGCUCACACACACAUACACACGCGAGAAACAUACU
U
.......((((((...((((((((((((((((((((.(((..(((((.(.........).)))))))).))))))))))))))))))))....)))))).. (-54.10)

Length sequence

: 101

Length match:

100