chr24_12

cmsearch-Rfam

Family :

mir-558

Id:

RF01021

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01021

Description:

not description

Score:

29.9

E-value:

0.0042

From sequence:

241072

To sequence:

241119

Alignments:

                                    v               v              NC
                 ::::::::<<-<<<-<<<<<<-<<<~~~~~~>>>>>>>>>->>>->>:: CS
  RF01021      1 gUGUGUGUGcGcguguGuGguUauu*[51]*aauacCaCaAacgGgCUG 94    
                 GUGUGUGUG:G:GUG:GUG : :U:      :A:: CAC:AAC:G:CUG
    chr24 241072 GUGUGUGUGUGUGUGGGUGUGGGUG*[ 5]*CACCUCACCAACAGGCUG 241119
                 *******************999986...9..7999************** PP

>>

RNAfold
>chr24_12
CACAGCUCAUGCACACACGUGUGUGUGUGUGUGUGUGGGUGUGGGUGUGU
GUCACCUCACCAACAGGCUGUUUGGUGCUUCUGUGUGCUCUCC
.(((((((((((((((((....)))))))))))(((.((((.(((((.....))))))))).)))))))))..(((((......))))).... (-40.20)

Length sequence

: 93

Length match:

46