chr24_13

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

38.1

E-value:

0.0019

From sequence:

167765

To sequence:

167871

Alignments:

                     vvvv                                                        vvvv       NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--~~~~~~-->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUG*[ 9]*UCCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G :+G+  GUG :UGUGUGUG::UG:G:GUGUG      U CAC:C:CA::CACACAC:CAC     : C:  
    chr24 167765 UGUAAGUCUGUGGUUGUGUGUGUGUGUGUGUGUG*[43]*UUCACACACACACACACACACACG----UGCAUA 167871
                 ******************************9998...9..458888888888888888887776....99**** PP

>>

RNAfold
>chr24_13
GUAAGUCUGUGGUUGUGUGUGUGUGUGUGUGUGUGUAUCACUGAAGGGCU
UCUCUGUCCUAAAUAAUUUGUUGUUCUUCACACACACACACACACACACG
UGCAUA
.......((((..((((((((((((((((((((((.........(((((......))))).(((((....)))))...))))))))))))))))))))))..)))) (-46.80)

Length sequence

: 106

Length match:

105