chr24_14

cmsearch-Rfam

Family :

mir-581

Id:

RF00961

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00961

Description:

not description

Score:

29.9

E-value:

0.0096

From sequence:

167779

To sequence:

167874

Alignments:

                                        vvvv                                       vvvv                           NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<<..<<<<<<<____...________________>>>>>>>>>>>>>>>>->>>>>>>>>>>>>>>>>>:: CS
  RF00961      1 GuucuGuGgagGuauuCuuGuGuuCuc..uaGauCaGUGC...UUUUAGAAAAUUUGUGuGauCuagaGaaCaCaAaGaauaCcucCaCagaaCCA 91    
                    :UGUG:::GU:U:::UGUGU++ +  :A::  : U     U  UA A AAUUUGU :  ::U:    ACACA :::A:AC:::CACA:   CA
    chr24 167779 UGUGUGUGUGUGUGUGUGUGUGUAUCAcuGAAGGGCUUCUcugUCCUAAAUAAUUUGUUGUUCUUC----ACACA-CACACACACACACACGUGCA 167869
                 ****************99999985544113333333322211122345555556665543333333....79999.9******************* PP

                       NC
                 ::::: CS
  RF00961     92 uCUGC 96    
                 U U C
    chr24 167870 UAUAC 167874
                 ***** PP

RNAfold
>chr24_14
GUGUGUGUGUGUGUGUGUGUGUAUCACUGAAGGGCUUCUCUGUCCUAAAU
AAUUUGUUGUUCUUCACACACACACACACACACACGUGCAUAUAC
(((((((((((((((((((((.........(((((......))))).(((((....)))))...))))))))))))))))))))).......... (-44.50)

Length sequence

: 95

Length match:

94