chr24_5

cmsearch-Rfam

Family :

mir-202

Id:

RF00705

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00705

Description:

not description

Score:

28.4

E-value:

0.007

From sequence:

497619

To sequence:

497701

Alignments:

                         v    v                                                          v   v            NC
                 ::::<<<<<<<.-<<<<<<<<<<<-<<<<<<<<<<<<___________>>>>>>>>>>>>-->>>>>>>>>>>->>>>>>>::::::: CS
  RF00705      1 CUCGccGucCC.UUUuUCCuAUGCAUAuaCcuCUUugAgaaucuGaucuaAAGagGuaUAggGCAUgGGAaAAuGGggCggcagaguu 87    
                 CU  :::U C:   :U:C :A:G  UAU:CC:CU:::AG A   G++ :::AG:GG:AUA   C:U: G:A:  :G G::: AG+   
    chr24 497619 CUUUUUCUACUcACCUGCGCACG--UAUUCCCCUGGGAGCACACGGCACCCAGGGGAAUA---CGUGCGCAGAGAGGGGGAAAGGAGA 497701
                 ********999558999999*99..9*********************************9...99*999999999999999******* PP

RNAfold
>chr24_5
CCUUUUUCUACUCACCUGCGCACGUAUUCCCCUGGGAGCACACGGCACCC
AGGGGAAUACGUGCGCAGAGAGGGGGAAAGGAGAGG
(((((((((.(((..(((((((((((((((((((((.((.....)).))))))))))))))))))))).))))))))))))..... (-61.10)

Length sequence

: 86

Length match:

81