chr24_8

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.1

E-value:

0.0064

From sequence:

647638

To sequence:

647566

Alignments:

                        v          v                 v          v                   NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<~~~~~~>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUc*[24]*ggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG G::+ :G:GG::GGG GG : :      :: CC CCC::CC:C: C::C C U+UUCC A A+
    chr24 647638 UGGGGGGUGGAGGAGGGGAGGGGCG*[13]*CCUCCGCCCCUCCUCUUCCUCUCGUUUUCCGAUAC 647566
                 ******************9999864...8..488999***************************** PP

>>

RNAfold
>chr24_8
AACGCGUAUCGGAAAACGAGAGGAAGAGGAGGGGCGGAGGCUCGUUCGUA
CACCGCCCCUCCCCUCCUCCACCCCCCACACACG
........(((.....)))(((((.(.((((((((((..((......))...))))))))))).)))))............... (-34.70)

Length sequence

: 84

Length match:

71