chr25_12

cmsearch-Rfam

Family :

mir-455

Id:

RF00709

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00709

Description:

not description

Score:

28.9

E-value:

0.0068

From sequence:

151314

To sequence:

151227

Alignments:

                                                                                                          NC
                 ::::<<<-<--<<-<<<<<<<<<<<<<<<<<-<<<-<<<__~~~~~~>>>->>>->>>>>>>>>>>>>>>>>->..>-->->>>:::: CS
  RF00709      1 UCCCuGguGUGaGgGuauguGCCcguGGaCuACaucGuGGA*[ 6]*CaCCauGCaGuCCacgGGCauauaCAC..uUgCccCaaGGc 86    
                 U   UG: GUGAG GU:U:UG ::GUGG:   CAU+:U: A      :A:CAUG   :CCAC:: CA:A:ACAC  U GC :CAAGG 
    chr25 151314 UGUGUGU-GUGAGUGUGUGUGGGUGUGGG---CAUUCUCAA*[14]*GAGCAUG---CCCACACUCACACACACagUGGC-ACAAGGG 151227
                 ******9.799877777777777777776...666666543...7..5666666...67777777777777776336677.9****** PP

RNAfold
>chr25_12
CCUUGUGCCACUGUGUGUGUGAGUGUGGGCAUGCUCAAUUUGUUCGCUAC
UUGAGAAUGCCCACACCCACACACACUCACACACACA
...((((.....(((((((((.((((((((((.(((((...((.....))))))).)))))))))).))))))))).....)))).. (-43.30)

Length sequence

: 87

Length match:

86