chr25_13

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

44.8

E-value:

6.3e-05

From sequence:

137105

To sequence:

137186

Alignments:

                     v    v   v    v                                          v   v  v    v       NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--<<___~~~~~>>-->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUGuCGCU*[2]*GgUCCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G G:GU :G   GU  GUG::UG:G:GUGUG:: CU     ::  CAC:C:CA::CAC  AC C: AC:C C:C:C+
    chr25 137105 UGUGCGUGUAGGCACGUGCGUGUGUGUGUGUGUGUUUCU*[7]*AACACACACACACACACAUACACCCACACACACACC 137186
                 **********************************99876..7..8899******************************** PP

>>

RNAfold
>chr25_13
GUGCGUGUAGGCACGUGCGUGUGUGUGUGUGUGUUUCUUUCGAUAAACAC
ACACACACACACAUACACCCACACACACACC
(((.((((.((...(((.((((((((((((((((((........)))))))))))))))))).))).)).)))).)))... (-43.40)

Length sequence

: 81

Length match:

80