chr25_15

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

35.2

E-value:

0.0085

From sequence:

277432

To sequence:

277521

Alignments:

                          vv                                                       vv            NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--<<~~~~~~>>-->>>>>>>>>>.>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUGuC*[ 5]*GgUCCaCgCuCaug.CaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G G:GU  G   GUGUGUG::UG:GUGUGUG::      ::  CACGC:CA:: CACACAC CA AC:C C:C: +
    chr25 277432 GGUGUGUGU--G-GGGUGUGUGGGUGUGUGUGUGUG*[20]*CAGUCACGCACACCuCACACACUCAGACACGCACCAC 277521
                 ********8..4.44999999999999999999976...9..6778********8669******9999*********** PP

RNAfold
>chr25_15
GUGUGUGUGGGGUGUGUGGGUGUGUGUGUGUGUUUGCUGGUACUUUGCCU
CGCAGUCACGCACACCUCACACACUCAGACACGCACCAC
((((((((.(((((((((((.(((((((((...((((.((((...))))..)))).))))))))))))))))))))..))))))))... (-52.10)

Length sequence

: 89

Length match:

88