chr25_16

cmsearch-Rfam

Family :

mir-942

Id:

RF00997

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00997

Description:

not description

Score:

33.7

E-value:

0.00063

From sequence:

137186

To sequence:

137103

Alignments:

                 v                v                 v              v                 v                v NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<______________>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> CS
  RF00997      1 auuagGagaGuacCuuCuCuGuuucGGCCacGuGuGUACUCACAGCCCCUCaCaCguGGCCgaaaCaGaGaaGguaCucuCcuaau 86    
                  :U::G G:GU:::    :: :U::G:::::GUGU UA   A AG      ACAC:::::C::A: ::    :::AC:C C::A: 
    chr25 137186 GGUGUGUGUGUGGGUGUAUGUGUGUGUGUGUGUGUUUAUCGAAAGAAA--CACACACACACACACGCACGUGCCUACACGCACACA 137103
                 ****************99999999999999999999998888888765..45666666666666666667789************* PP

RNAfold
>chr25_16
UGUGUGCGUGUAGGCACGUGCGUGUGUGUGUGUGUGUUUCUUUCGAUAAA
CACACACACACACACAUACACCCACACACACACCA
.(((((.((((.((...(((.((((((((((((((((((........)))))))))))))))))).))).)).)))).))))).. (-47.60)

Length sequence

: 85

Length match:

82