chr25_4

cmsearch-Rfam

Family :

mir-150

Id:

RF00767

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00767

Description:

not description

Score:

33.5

E-value:

0.0014

From sequence:

138115

To sequence:

138046

Alignments:

                                          v     v          v     v                         NC
                 :<<<<<<-<-<<<<<<<<<<<<---<<<<<<<<<~~~~~~>>>>>>>>>-->>>>>>>>>>>>->->>>>>>: CS
  RF00767      1 CuCCcCgaggCccuguCuCCCaACCCuuGUACCA*[18]*UGGUACagGuuuGGGgGacaggGAcccGgGGaC 85    
                 C:CCCC: : :C::::C:C CA CC :: :A C:      :G U: :: U+UG G:G::::G: : :GGGG:C
    chr25 138115 CCCCCCCCCCUCUCUCCCCGCAGCCCGCCCAACG*[ 3]*CGCUGGGCAUAUGUGGGGAGAGAGGGGGGGGGC 138046
                 *************************999999775...8..577999999************************ PP

>>

RNAfold
>chr25_4
CUCCAGUGCCCCCCCCCUCUCUCCCCACAUAUGCCCAGCGUACCGUUGGG
CGGGCUGCGGGGAGAGAGGGGGGGGGGGGCACUGG
..((((((((((((((((((((((((.((..(((((((((...)))))))))...)).)))))))))...))))))))))))))) (-72.40)

Length sequence

: 85

Length match:

68