chr25_7

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

34.5

E-value:

0.00018

From sequence:

138043

To sequence:

138121

Alignments:

                                         v                                    v                          NC
                 ::<<<<<--<<<<<<<<<<<<<<<<<<<-<<<-<<<<<<<~~~~~~>>>>>>>>>>->->>>>>>>>>>>>>>>>>>--->>>>>:: CS
  RF01064      1 aUcguuCgagucgCcgccCuucuCaCaCACCucaCuaaCa*[19]*uGuuaGuaGGCGUuGuGggaaGggcgGcgacgauGaacgua 100   
                 A :G::C  ::C:CC:C:CU:C:C CA A ::  C:A:C:      :G:U:G ::    UG G:G:AG:G:GG:G::G  G::C:++
    chr25 138043 AGUGCCC--CCCCCCUCUCUCCCCACAUAUGC--CCAGCG*[ 3]*CGUUGG-GCGGGCUGCGGGGAGAGAGGGGGGGGGGGGCACU 138121
                 *******..*******************9985..666666...7..666666.589999**************************** PP

>>

RNAfold
>chr25_7
CCCCCACUCCAGUGCCCCCCCCCUCUCUCCCCACAUAUGCCCAGCGUACC
GUUGGGCGGGCUGCGGGGAGAGAGGGGGGGGGGGGCACUGGAGUGGCAAG
...(((((((((((((((((((((((((((((.((..(((((((((...)))))))))...)).)))))))))...)))))))))))))))))))).... (-85.60)

Length sequence

: 100

Length match:

77