chr25_8

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.4

E-value:

0.00051

From sequence:

233420

To sequence:

233318

Alignments:

                                                                               NC
                 :<<<<<-<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGG*[29]*CCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG:GG:+GGG:GG::GG::GG        CC::CC::CC:CCCC:CC:CC G + +A A +
    chr25 233420 UGAGGAGGGGAGGGGGGGGGGC*[48]*GCCUUCCCCCCUCCCCUCCUCCAGGCAUAUACA 233318
                 ******9999999999999995...9..5999999999999999***************** PP

>>

RNAfold
>chr25_8
GUAUAUGCCUGGAGGAGGGGAGGGGGGAAGGCGGGUACGCGAAAAAGGAA
AACGGAAAAGAGCGGAUGCGGGAUGCCUGUGCCCCCCCCCCUCCCCUCCU
CA
...........((((((((((((((((..(((((((((.((...........((........))....)).).)))))..)))..)))))))))))))))). (-54.00)

Length sequence

: 102

Length match:

101