chr26_19

cmsearch-Rfam

Family :

TB9Cs1H2

Id:

RF01552

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01552

Description:

not description

Score:

109.2

E-value:

4.5e-21

From sequence:

584260

To sequence:

584345

Alignments:

                                                                                                        NC
                 ::<<<-<<------<<<______________________________________________>>>------->>->>>::::::: CS
  RF01552      1 aACGGGGCAAUCCGAGGUgcacGUGgcuUGcgcCcGCUCGCGGGaCUcuGUGCCGuGGuGcgaCCUUCUGGUAGCuCCGGAGAgcC 86    
                 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGG+CUC GUGCCGUGGUGCGACCUUCUGGUAGC+CCGGAGAGCC
    chr26 584260 AACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGGGCUCGGUGCCGUGGUGCGACCUUCUGGUAGCACCGGAGAGCC 584345
                 ************************************************************************************** PP

>>

RNAfold
>chr26_19
ACGGGGCAAUCCGAGGUGCACGUGGCUUGCGCCCGCUCGCGGGGCUCGGU
GCCGUGGUGCGACCUUCUGGUAGCACCGGAGAGCC
....(((..(((..(((((.((.(.((((((......)))))).).)))))))..(((((.(((....))).))))))))..))) (-37.80)

Length sequence

: 85

Length match:

84