chr26_6

cmsearch-Rfam

Family :

MIR1151

Id:

RF00926

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00926

Description:

not description

Score:

32.0

E-value:

0.0048

From sequence:

494571

To sequence:

494487

Alignments:

                                                                                                       NC
                 <<<<-<<<<<<<<<---<<<<<<<<<-<<<<<<<<<-<<~~~~~~>>->>>>>>>>>->>>>>>>>>--->>>>>>->>>->>>> CS
  RF00926      1 gcggagcgugccgcucAccggccgcggcaguccggggcc*[66]*ggAcccggacugAcgcggccggcAugcggcaacgcaccgc 145   
                 G:::A:CG::C::CU  :CG::::::GC:G:CCG:: :C      G: ::CGG:C:G ::::::CG:   G::G:: CG: :::C
    chr26 494571 GUCGAUCGCACACCU--UCGAUUCACGCGGGCCGCCCUC*[12]*GACGGCGGCCCGCGUGAAUCGA---GGUGUG-CGAGUGGC 494487
                 *******99999999..7777777777999999998776...8..6778999999997777777777...999999.9******* PP

RNAfold
>chr26_6
CAUGCAUCAAAAAAAAAAAUACAGCCCCUGCCACUCGCACACCUCGAUUC
ACGCGGGCCGCCGUCAGGGUCCUGCUCGAGGGCGGCCCGCGUGAAUCGAA
GGUGUGCGAUCGACGCAAGCCUGUCUGACACCCAUCGCGCAGCA
.......................((...(((...((((((((((((((((((((((((((((.((.((((...)))))).)))))))))))))))))).)))))))))).....))).))((((.(((......))).)))).. (-75.10)

Length sequence

: 144

Length match:

83