chr27_19

cmsearch-Rfam

Family :

MS2

Id:

RF02359

Type:

Cis-reg;

Taxonomy:

Viruses;

Ontology:

Not found

Description:

not description

Score:

25.3

E-value:

0.0089

From sequence:

602854

To sequence:

602892

Alignments:

                                                    NC
                 :::::::::::::::::<<<<<-~~~~~~>>>>> CS
  RF02359      1 AGACuCCGgCCAUUCaAACAUGA*[ 8]*CAUGU 36    
                 AGA+   GGCCAUUC+AACA GA      C UGU
    chr27 602854 AGAUGUGGGCCAUUCCAACACGA*[11]*CGUGU 602892
                 **********************8...9..***** PP

RNAfold
>chr27_19
GAUGUGGGCCAUUCCAACACGAAUGCUGCGCCUCGUGU
((.(((.(.(((((......))))).).))).)).... ( -8.80)

Length sequence

: 38

Length match:

37