chr27_23

cmsearch-Rfam

Family :

TB11Cs4H1

Id:

RF01539

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01539

Description:

not description

Score:

91.7

E-value:

7.6e-19

From sequence:

382430

To sequence:

382500

Alignments:

                                                                                          NC
                 :::<<<<<<-------<<<---<<<<<_______________>>>>>----->>>------->>>>>>:::: CS
  RF01539      1 acAUCUUGcCCUGUCUGGCacCCuGuCUgUaCAcCuGUCaGUGaCgGagcucGCCCGAAAGcgCAAGAGAGA 72    
                  CAUCUUG: CUGUCUGGCA CC:GUCU+UACACCUGUCAGUGAC:GAGC+CGCCCGAAAGC:CAAGAGAGA
    chr27 382430 GCAUCUUGAUCUGUCUGGCA-CCUGUCUUUACACCUGUCAGUGACAGAGCCCGCCCGAAAGCUCAAGAGAGA 382500
                 ********************.*************************************************** PP

>>

RNAfold
>chr27_23
GCAUCUUGAUCUGUCUGGCACCUGUCUUUACACCUGUCAGUGACAGAGCC
CGCCCGAAAGCUCAAGAGAGAA
...((((((.((.((.(((.((((((...((....))....))))).)...))).)).)).))))))..... (-19.40)

Length sequence

: 72

Length match:

69