chr27_4

cmsearch-Rfam

Family :

mir-14

Id:

RF00752

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00752

Description:

not description

Score:

28.7

E-value:

0.0041

From sequence:

1039848

To sequence:

1039946

Alignments:

                                                               NC
                  <<<<<<<<-<<<<--<<<<~~~~~~>>>>-->>>>->>>>>>>> CS
  RF00752       1 uGUGGGAGCGAGAuuaaGa*[29]*uCuuUUUCUCUCUCCUAUa 67     
                  :: G:GAGCGAGA  :AG:      :CU:UUUCUCUCUC:U ::
    chr27 1039848 AGAGAGAGCGAGAGCGAGG*[61]*UCUCUUUCUCUCUCUUUCU 1039946
                  ******************9...*..8****************** PP

>>

RNAfold
>chr27_4
GAGAGAGCGAGAGCGAGGACCGUACGCGCGCUUAUGUGUCUCCCUGCGUA
UGUGGCUGUCGUUGUUGCUGCUCUCUUUCUCUCUUUCUCUCUCUUUCU
(((((((((..(((((.((((((((((((((....))))......))))))).....))).)))))..)))))))))..................... (-33.70)

Length sequence

: 98

Length match:

97