chr27_6

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.9

E-value:

0.0022

From sequence:

364608

To sequence:

364711

Alignments:

                              v             v               v            v                         NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[ 9]*gCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  :G:G:+:GGGGG ::G::GGG: ::G G G  A       CC C:::CCC::C:: CCCCC:C:C:C:+   UC++   U
    chr27 364608 GAGAGAGAGGGGGAGAGAAGGGGAGGGAGUGGCA*[32]*CCCCCCCCCCCUCCUUCCCCCCUCUCUCUU---UCUCUUGU 364711
                 *************************999999876...9..48889999999***9999999999999995...56667789 PP

>>

RNAfold
>chr27_6
AGAGAGAGGGGGAGAGAAGGGGAGGGAGUGGCAGUGAGGUGAGUCCUUCG
AACGUCUAGUCACUCCCCCCCCCCCCUCCUUCCCCCCUCUCUCUUUCUCU
UGU
((((((((((((.(((.(((((.(((((((((...((.((..(.....)..)).))..))))))))).....))))).))).))))))))))))......... (-56.50)

Length sequence

: 103

Length match:

102