chr27_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.6

E-value:

0.00025

From sequence:

364702

To sequence:

364600

Alignments:

                              v                                      v                         NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAG*[13]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G:G::AG:GGGG AG::: GG: : GGG :      :CCC ::CC :::CU CCCC:C ::C:C    UC++    
    chr27 364702 AGAGAGAGGGGGGAAGGAGGGGGGGGGGGGA*[36]*UCCCUCCCCUUCUCUCCCCCUCUCUCUC----UCUCUGCG 364600
                 *******************999988888744...9..5777777777788888888888888888....56667889 PP

>>

RNAfold
>chr27_7
GCAGAGAGAGAGAGAGGGGGAGAGAAGGGGAGGGAGUGGCAGUGAGGUGA
GUCCUUCGAACGUCUAGUCACUCCCCCCCCCCCCUCCUUCCCCCCUCUCU
CU
......((((((((.(((((((((..((((.(((((((((...((.((..(.....)..)).))..))))))))).))))...)))..)))))))))))))) (-57.60)

Length sequence

: 102

Length match:

101