chr27_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

38.3

E-value:

4.9e-05

From sequence:

949669

To sequence:

949581

Alignments:

                            v                                                  v                       NC
                 :<<<<<-<<<<<<<<<<<<<<<.<-<<<<<-<---<~~~~~>-->>>>>>>.>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGG.cUcAgGgAGAAAg*[6]*cagCcCcUgg.CCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G::G:+GG:G G::G:::G G CUCAG: AG A :     :AGC :CUGG C C:::C::C C:CCC:C::CCU+U+CC+ A U
    chr27 949669 GGAAGAGGGAGGGGGGGAAGUGgCUCAGAGAGGAGG*[9]*UAGCUUCUGGgCACUUUCUCCGCUCCCUCUUCCUUUCCCUCACU 949581
                 ****************99999889********9975..6..788******97999999*************************** PP

>>

RNAfold
>chr27_9
GUGAGGGAAAGGAAGAGGGAGCGGAGAAAGUGCCCAGAAGCUAUGUCGUC
UCCCUCCUCUCUGAGCCACUUCCCCCCCUCCCUCUUCC
..........(((((((((((.((.(.((((((.((((.....................)))).).))))).).)).))))))))))) (-32.50)

Length sequence

: 88

Length match:

87