chr28_14

cmsearch-Rfam

Family :

MIR815

Id:

RF00884

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00884

Description:

not description

Score:

35.7

E-value:

0.00026

From sequence:

241298

To sequence:

241379

Alignments:

                    v            v               v               v               v             v    NC
                 <<<<<<<<<<<<<<-<<--<<<<<<<<.-<<<<<-<<<_____>>>->>>>>-->>>>>>>>-->>->>->>>>>>>>>>>> CS
  RF00884      1 cUucccAauCUcUcaAUUUCcUUcUCu.AagAcaaaCuCUUAGgGuGugUuuGAgGAgAAgGGGAUUgAGgAGauUgggaAg 81    
                 CU: ::: :C:::: :  UCC::CUC:  ::: :A::UCUU  G:: : :::G :GAG::GGGG : ::G::G: ::: :AG
    chr28 241298 CUCGUUUUCCCUCUCCCCUCCCCCUCCcCGCCUCACGUCUUCAGCGAGUGGCGGGGAGGGGGGGAGAGGGAGGGGAGGGGAG 241379
                 ************9999999999999874699999999999999999999999889999************************ PP

>>

RNAfold
>chr28_14
UCGUUUUCCCUCUCCCCUCCCCCUCCCCGCCUCACGUCUUCAGCGAGUGG
CGGGGAGGGGGGGAGAGGGAGGGGAGGGGAG
((.((((((((((((.(((((((((((((((.(.(((.....))).).))))))))))))))).).))))))))))).)). (-60.70)

Length sequence

: 81

Length match:

80