chr28_8

cmsearch-Rfam

Family :

mir-33

Id:

RF00667

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00667

Description:

not description

Score:

26.8

E-value:

0.0098

From sequence:

42575

To sequence:

42541

Alignments:

                 v                                   v  NC
                <<<---<<<<<<<<-<-~~~~~~>->>>>>>>>--->>> CS
  RF00667     1 CcguGGUGCAuUGuAGU*[36]*CuaCAgUGCAacccgG 69   
                C :UG UGCA:UG:AGU      CU:CA:UGCAACC: G
    chr28 42575 CUCUGUUGCACUGCAGU*[ 2]*CUGCAGUGCAACCGCG 42541
                ****************8...8..**************** PP

RNAfold
>chr28_8
ACCUGAGGCGGAGGGGCGCGGUUGCACUGCAGGUACUGCAGUGCAACAGA
GUGAAGGUGCAAACUGUA
((((...(((......))).((((((((((((...)))))))))))).......)))).......... (-26.50)

Length sequence

: 68

Length match:

33