chr28_9

cmsearch-Rfam

Family :

mir-497

Id:

RF00793

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00793

Description:

not description

Score:

32.2

E-value:

0.0068

From sequence:

241299

To sequence:

241391

Alignments:

                                                                                                 NC
                 :::::::::<<<<<<<<-<<<-<-<<<<-<<<<-~~~~~~>>>>->>>>->->>>->>>>>>>>::::::::::::::: CS
  RF00793      1 ccacuCcaguCccgCccCCGCcCCagCaGCaCaC*[39]*uGuGGuGuuAGAGCGAggGuggGgGAGGcAcCgcugagg 112   
                  C  U    : C::CCC C:CCC ::C:GC:::       :::GG:G::AGAG:GAGGG::G :GAGG   C    A G
    chr28 241299 UCGUUUUCCCUCUCCCCUCCCCCUCCCCGCCUCA*[20]*GAGGGGGGGAGAGGGAGGGGAGGGGAGGGGGCCAGCACG 241391
                 *******************************986...8..89************************************* PP

RNAfold
>chr28_9
CCUUCUUCCUCGUUUUCCCUCUCCCCUCCCCCUCCCCGCCUCACGUCUUC
AGCGAGUGGCGGGGAGGGGGGGAGAGGGAGGGGAGGGGAGGGGGCCAGCA
CGUAGAAAGGAA
(((((((((((.((((((((((((.(((((((((((((((.(.(((.....))).).))))))))))))))).).))))))))))).)))))))............)))).. (-72.40)

Length sequence

: 112

Length match:

91