chr29_1 |
cmsearch-Rfam |
Family : Afu_254 |
Id: RF01504 |
Type: Gene; sRNA; |
Taxonomy: Eukaryota; | Ontology: Not found |
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Description: not description |
Score: 34.4 |
E-value: 0.0067 |
From sequence: 373121 |
To sequence: 373066 |
Alignments: v v NC <<<<--.-..<<<_____>>>--->>>>---<<<------<<____>>------>>> CS RF01504 83 uGCucC.u..GCaACUgCuGCUCCaGCaACUGCaACucCUGCuCcUGCugCuccuGC 136 GC:CC GC:ACUGC:GCU C:GC CUGC CU+CUGCU CUGCUGCU C GC chr29 373121 AGCACCg-uuGCUACUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGC 373066 ******5.56*********************************************** PP
|
RNAfold |
>chr29_1 GCGCCCAAAAGUCUUUCCCCAUAUCCCUUUUCCUCUCCUGUGGACCGGAG GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGUAGCAAC GGUGCUACGCCCUGCUGAGACGGCAAGAAUAAGAGAGAUGGCAACGCAUG UGUAACC (((.(((....((((((........((((((((........)))..)))))..((.((.((.((....)).)).)).))..((((((..((.((((((....)))))))).))))))...............)))))))))...))).......... (-43.40) |
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Length sequence: 157 |
Length match: 54 |