chr29_15

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

35.6

E-value:

0.007

From sequence:

872603

To sequence:

872503

Alignments:

                                                                      NC
                 <<<<<<<<<<<<-<-<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGu*[31]*gCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G:G:GU UG GUGUGU:UG:      :CA:ACACCCA AC:C:C:C:C 
    chr29 872603 UGUGUGUGUGUGUGUGUGUAUGU*[55]*ACAUACACCCAUACACACACACA 872503
                 **********************8...*..8********************** PP

>>

RNAfold
>chr29_15
GUGUGUGUGUAUGGGUGUAUGUGUCACUUUUUCUUCGGCCUUCCAACGCC
AUUAGACCAUCCUCUCCUUUACUACAGACAUACACACACACACACACACA
((((((((((.((.((((((((.(............(((........)))...(((......)))..........).)))))))).)).)))))))))). (-30.70)

Length sequence

: 100

Length match:

99