chr29_16

cmsearch-Rfam

Family :

MIR815

Id:

RF00884

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00884

Description:

not description

Score:

30.4

E-value:

0.0065

From sequence:

1098033

To sequence:

1098107

Alignments:

                                 v          v      v          v                 NC
                  <<<<<<<<<<<<<<-<<--<<<<<<<<~~~~~~>>>>>>>>-->>->>->>>>>>>>>>>> CS
  RF00884       1 cUucccAauCUcUcaAUUUCcUUcUCu*[26]*gGAgAAgGGGAUUgAGgAGauUgggaAg 81     
                  C :C:C:::CUCU: +UUUC:::C C        G G:::GGGA  :AGGAG:::G:G: G
    chr29 1098033 CUGCGCCUCCUCUU-UUUUCUCCCUCA*[22]*GGGGGGGGGGA-GGAGGAGGAGGCGCGG 1098107
                  ************88.566777777764...4..25555555555.5*************** PP

RNAfold
>chr29_16
UGCUGCGCCUCCUCUUUUUUCUCCCUCACCGGGUUUUUUUCUGAGGGGAC
GGGGGGGGGGAGGAGGAGGAGGCGCGGAUG
..(((((((((((((((((((((((((.(((..(((((....)))))..))))))))))))))))))))))))))))... (-54.40)

Length sequence

: 80

Length match:

73