chr29_6

cmsearch-Rfam

Family :

mir-150

Id:

RF00767

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00767

Description:

not description

Score:

33.2

E-value:

0.0018

From sequence:

159734

To sequence:

159845

Alignments:

                  v                                   v          v                                    v  NC
                 :<<<<<<-<-<<<<<<<<<<<<---<<<<<<<<<<-<<<<~~~~~~>>>->->>>>>>>>>>--.>>>>>>>>>>>>->->>>>>>: CS
  RF00767      1 CuCCcCgaggCccuguCuCCCaACCCuuGUACCAGuGcug*[ 5]*cagaCcCUGGUACagGuu.uGGGgGacaggGAcccGgGGaC 85    
                 + C:CC:+: CCC:GU :CCC: C C:: UA: ::UG ::      :: AC :: :UA ::G   :GGG: AC:GGG : :GG:G  
    chr29 159734 UGCUCCAUCACCCAGUUCCCCUGCACCCUUAUGUAUGUGU*[31]*ACUACAUACAUAAGGGGGcAGGGGGACUGGGUGAUGGGGAG 159845
                 ************************************9765...9..56789********999877********************** PP

>>

RNAfold
>chr29_6
GCUCCAUCACCCAGUUCCCCUGCACCCUUAUGUAUGUGUGUAUAUAUGUA
UAUAAAUAUAUUUAGUCAUGACUACAUACAUAAGGGGGCAGGGGGACUGG
GUGAUGGGGAG
.((((((((((((((((((((((.((((((((((((((((..((.((((((....)))))).))..)))....))))))))))))).)))))))))))))))))))))).. (-73.60)

Length sequence

: 111

Length match:

110