chr29_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.5

E-value:

0.0052

From sequence:

227781

To sequence:

227890

Alignments:

                     v                                                            v                NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~>>>>>>>>>>.>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[10]*CcCcUggCCC.cccCugCCCccCCgccCCcugUuccaaaau 84    
                  G:  : G:GGGG::G::GGGG: ::GGGAG  A      CCCC:::CCC C::C::CCCC:C :  :CCUG ++C+   U
    chr29 227781 AGAGGA-GAGGGGAGGCAGGGGAGGGGGGAGGCA*[36]*CCCCCCUCCCaCUGCCUCCCCUCUUAUUCCUGCCUCCGCCU 227890
                 ***965.999999999999************765...9..99999999998999999999999999*************** PP

>>

RNAfold
>chr29_9
GAGGAGAGGGGAGGCAGGGGAGGGGGGAGGCACACGCAUGCACACCCACG
CCCCUCACAGUGCGGCUACCCCCCUCCCACUGCCUCCCCUCUUAUUCCUG
CCUCCGCCU
(((((((((((((((((((((((((((.(((...(((((((........))........)))))))).)))))))))).)))))))))))))........))))..... (-66.20)

Length sequence

: 109

Length match:

108