chr2_10

cmsearch-Rfam

Family :

mir-268

Id:

RF00834

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00834

Description:

not description

Score:

30.8

E-value:

0.0042

From sequence:

202825

To sequence:

202719

Alignments:

                              v      v                                                       v      v            NC
                 ::::::::::::<<<<<<<-<<<<<<-<<<<<<<<<---<-<<<<<__~~~~~~>>>>>->>>>>>>>>>->>>>>>->>>>>>>:::::::::: CS
  RF00834      1 GGAAGUGgCUUUgaaGcgGCaagaauUaGaaGcaGuUUGGuGucgGac*[ 6]*CcgaCuCaCugCuuCuUguuuuuUCcgCuucuUuUuCUuuu 95    
                 GGAAGU      G :G:GG  :G::  :GA:G AG:  GG :::GGA       CC::: C:CU C:UC:U ::U: UCC:C: CUU  UCU  U
     chr2 202825 GGAAGU------GGGGCGGG-GGGG--GGAGGGAGGGAGGGAGGGGAA*[28]*CCCCUCCCCUUCCUCCU-CCUCCUCCUCCGCUUCCUCUCGU 202719
                 ****96......77888884.4444..999999999888888888864...9..8888889*********7.789999999999*********** PP

>>

RNAfold
>chr2_10
CGAGAGGAAGCGGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCU
GAGCCUCCUUCGCUCUCUUCCCCUCCCUCCCUCCCUCCCCCCCCCGCCCC
ACUUCC
.(((.((..((((.((.((.((((((((..(((((((((((...(((...(((....))))))....))))))))))).))).))))).)))))))).)).))).. (-53.90)

Length sequence

: 106

Length match:

105