chr2_11

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.9

E-value:

0.0002

From sequence:

202730

To sequence:

202824

Alignments:

                          v                                               v                     NC
                 :<<<<<-<<<<<.<<<<<<<<<<<-<<<<<-~~~~~~>>>>>>>>>>>>>>>>..>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGG.GcaGgggGGGcUcAgGgA*[15]*cCcUggCCCcccCugC..CCccCCgccCCcugUuccaaaau 84    
                  GG:G:AG: GG G:AGG::GGG: : G GA      C C ::CCC::CCU:C  CC :CC:C:CCC G +CCA   +
     chr2 202730 CGGAGGAGGAGGaGGAGGAAGGGGAGGGGGA*[23]*CUCUUCCCCUCCCUCCcuCCCUCCCCCCCCCGCCCCACUUC 202824
                 ********99986889********9999997...9..77888888888887765578889999999999********* PP

>>

RNAfold
>chr2_11
GGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCUGAGCCUCCUUC
GCUCUCUUCCCCUCCCUCCCUCCCUCCCCCCCCCGCCCCACUUC
((.((.((.((((((((..(((((((((((...(((...(((....))))))....))))))))))).))).))))).)))))).......... (-45.70)

Length sequence

: 94

Length match:

93