chr2_12

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

38.9

E-value:

3.5e-05

From sequence:

202820

To sequence:

202719

Alignments:

                      v                     v              v                    v                 NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[10]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UGG G +GG:GG :::GG::GG: : G G G AA      CC C ::CC::CC::: CC:CC  C CC  +U+C++   U
     chr2 202820 UGGGGCGGGGGGGGGAGGGAGGGAGGGAGGGGAA*[28]*CCCCUCCCCUUCCUCCUCCUCCUCCUCCGCUUCCUCUCGU 202719
                 **********************976666655555...9..899999********************************** PP

>>

RNAfold
>chr2_12
CGAGAGGAAGCGGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCU
GAGCCUCCUUCGCUCUCUUCCCCUCCCUCCCUCCCUCCCCCCCCCGCCCC
A
.....((..((((.((.((.((((((((..(((((((((((...(((...(((....))))))....))))))))))).))).))))).)))))))).)). (-52.30)

Length sequence

: 101

Length match:

100