chr2_16

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

33.6

E-value:

0.00055

From sequence:

202728

To sequence:

202802

Alignments:

                   v                    v           v    v            v                  v   NC
                 :<<<<-<<-<<-<<<<<<<--<<<<<<<<<<<-<<<____>>>-->>>>>>>>>>>>>>>>>>->->>>->>>>: CS
  RF00891      1 GGaagAgGAGGAaGCCCuGGAgGggCuGGaGGUgauGGAUguuUUCCuCCgGuuCuCaGGGCuCCACCucuuuCG 75    
                    ::A:GAGGA:G: ::GGA:G : :GG:GG :A G    U:  CC:CC: : C:C:: :C:CC CC:+::   
     chr2 202728 AGCGGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCUGAGCCUCCUUCGCUCUCUUCCCCUCCCUCCCUC 202802
                 *********************************99999999999******************************* PP

>>

RNAfold
>chr2_16
GCGGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCUGAGCCUCCU
UCGCUCUCUUCCCCUCCCUCCCUC
..((((((((.(((((((..((.((((((((.((......))..)))))))).)))))))))))).)))))... (-39.00)

Length sequence

: 74

Length match:

73