chr2_8

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

35.2

E-value:

0.0042

From sequence:

202824

To sequence:

202726

Alignments:

                                                                                                   NC
                 :<<<-<<<<<-<<<<<<--<<<<<<<<<<<<<<<<-<__~~~~~~>->>>>>->>>>>>>>>->>->>>>>>>>>>>>>>: CS
  RF00802      1 gagGcaGggGCGaGGgGCUGcggGgGgagCcggGCGGAG*[ 4]*CGGCcugcGcuuCcCccggCUCcCCuCCccCuCcuU 79    
                 GA:G  GG:GCG GG:   G:GG:GGGAG:::GG: G G      C :CC::C:CUUCC:CC :C  :CC CC:CC C:U 
     chr2 202824 GAAG-UGGGGCGGGGG---GGGGAGGGAGGGAGGGAGGG*[30]*CCCCCUCCCCUUCCUCCUCC--UCCUCCUCCGCUUC 202726
                 ****.8********98...67888888888888887754...9..77899999999999999886..7************* PP

>>

RNAfold
>chr2_8
AAGCGGAGGAGGAGGAGGAGGAAGGGGAGGGGGACAUGCGCCUGAGCCUC
CUUCGCUCUCUUCCCCUCCCUCCCUCCCUCCCCCCCCCGCCCCACUUC
..((((.((.((.((((((((..(((((((((((...(((...(((....))))))....))))))))))).))).))))).))))))))........ (-51.70)

Length sequence

: 98

Length match:

97