chr30_14

cmsearch-Rfam

Family :

MIR529

Id:

RF00908

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00908

Description:

not description

Score:

26.6

E-value:

0.0089

From sequence:

915955

To sequence:

915834

Alignments:

                            v                  v          v                  v              NC
                 ::::<<--<--<<-<<<<<<<<<<<<<<-<<<<~~~~~~>>>>->>>>>>>>>>>>>>->>-->---->>:::: CS
  RF00908      1 acaUcaAGGCUaaAgGaaGaaGaGaGaGAGuaC*[63]*GuaCcCuCuCuCuuCuuCcCuuAGCUUCUugauug 131   
                  C+ :AA : U  A:GAA::AG:GAG:GAG ::      :: C C:CUC:CU::UUC:C   G: U UU:+   
    chr30 915955 GCGGGAAAAGUAGAAGAAAGAGGGAGGGAGCGG*[54]*CCUCUCCCUCCCUCUUUCUCUCUGUGUUUUCUCCU 915834
                 *****************************9766...9..5679******************************* PP

RNAfold
>chr30_14
UGAGAGGAGAAAACACAGAGAGAAAGAGGGAGGGAGAGGAAGAAGGAAAC
GCUUCGUUUUUUGUUUCGGCUUCUCUCCCCCCCCCGCUCGCCCCCGCUCC
CUCCCUCUUUCUUCUACUUUUCCCGCUCGGU
((((.((.(((((...(((.((((((((((((((((.((((((((((((((..........))))))..))))).)))..........((....)))))))))))))))))))))..))))))).)))).. (-51.00)

Length sequence

: 131

Length match:

120