chr30_8

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.8

E-value:

0.00022

From sequence:

767842

To sequence:

767701

Alignments:

                                                                                 NC
                 :<<<<<-<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGc*[27]*gCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UGGGG +GGGG G:AGGG:GG :      : CC:CCCU:C CCCCC CCCCC   +CC+ A +
    chr30 767842 UGGGGGGGGGGCGGAGGGAGGGA*[85]*UUCCUCCCUCCGCCCCCUCCCCCGACCCCCUACC 767701
                 ********************986...*..689******************************* PP

>>

RNAfold
>chr30_8
GUAGGGGGUCGGGGGAGGGGGCGGAGGGAGGAAACUUGUCGCUGCAAGCG
AUAGACAGAUGCGGGGCAGUGCUGAACGUCACCAACUCCGUCACCACCUU
UGACACUGAUGAGCACUCUCCCUCCCUCCGCCCCCCCCCCA
..........(((((.(((((((((((((((....((((((((...)))))))).........(((.((((((...(((((........((((.......))))..)))))))))))))))))))))))))))))))))). (-70.90)

Length sequence

: 141

Length match:

140