chr31_4

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.9

E-value:

0.0021

From sequence:

1029311

To sequence:

1029184

Alignments:

                                    v  v                    v  v                              NC
                  :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-~~~~~~>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772       1 UGGggcaGggGGGcaGgggGGGcUcAgGgA*[15]*cCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84     
                   GG:G +GG:GGG::::: :G :U:: GG       CC ::: C: :::::CCC:CCC C:CCC + UC++A A+
    chr31 1029311 GGGAGGGGGAGGGGGAAGAAGAGUGGGGGG*[59]*CCUCUCCCUCUUUCCCCCUCCCUCCCCCCUCUCUCACAC 1029184
                  ******999999999999999999999985...9..5566666777788999999999***************** PP

>>

RNAfold
>chr31_4
UGUGAGAGAGGGGGGAGGGAGGGGGAAAGAGGGAGAGGCGGACACAAGAA
AAAGGCGGAAUUCGAGGCGCACGACUCGUUUGCUGCAACAGCGGUACCCC
CCCACUCUUCUUCCCCCUCCCCCUCCC
.........((((((.(((((((((((((((((.(.((.((((..........((((((...((((........)))))))))).........)).))))))).))))..))))))))))))))))) (-58.80)

Length sequence

: 127

Length match:

126