chr31_6

cmsearch-Rfam

Family :

mir-497

Id:

RF00793

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00793

Description:

not description

Score:

36.7

E-value:

0.00057

From sequence:

509027

To sequence:

508937

Alignments:

                                                                                                        NC
                 :::::::::<<<<<<<<-<<<-<-<<<<-<<<<-<<<~~~~~~>>>->>>>->>>>->->>>->>>>>>>>::::::::::::::: CS
  RF00793      1 ccacuCcaguCccgCccCCGCcCCagCaGCaCaCuGu*[32]*aCaCuGuGGuGuuAGAGCGAggGuggGgGAGGcAcCgcugagg 112   
                 C  CUCC  U C::CCCC::CCC ::C:GC:CACUG        CACUG:G :G::AG G:: GGG::G G A G      UG G 
    chr31 509027 CUUCUCCCCUUCUACCCCUCCCCUCGCUGCUCACUGU*[11]*GCACUGAGCAGCGAGGGGAGGGGUGGGGCACGUCUGUGUGUGU 508937
                 ***********************************95...9..59***************************************** PP

>>

RNAfold
>chr31_6
ACACACACACACACACACAGACGUGCCCCACCCCUCCCCUCGCUGCUCAG
UGCGCGAAAACGAAACAGUGAGCAGCGAGGGGAGGGGUAGAAGGGGAGAA
GAGGAGAGAGGG
.............(((......)))((((((((((((((((((((((((.((..((....))...)).))))))))))))))))))))....))))................ (-58.20)

Length sequence

: 112

Length match:

89