chr32_1

cmsearch-Rfam

Family :

BjrC68

Id:

RF02353

Type:

Gene; sRNA;

Taxonomy:

Bacteria;

Ontology:

Not found

Description:

not description

Score:

23.4

E-value:

0.0098

From sequence:

366407

To sequence:

366483

Alignments:

                               v v                  v v                                   NC
                 :::::::::<<<<<<<<<________________>>>>>>>>>----<<<<<~~~~~~>>>>>::::::::: CS
  RF02353      1 ccagAacUACGGuccGGGCAaAUACCCGGCAAUGCCCggaCCGUcGAGGGGc*[16]*gCCCCUuUCUUUUu 82    
                  + G ACUACGG:: G GCA  U C CGGC A GC C ::CCG  GAG : C      G : C  UC   UU
    chr32 366407 GAGGUACUACGGCGCGUGCAGGUGCUCGGCGACGCCCUCGCCGAGGAGCAGC*[11]*GUUGCAAUCGACUU 366483
                 ************************************************9876...5..7899********** PP

RNAfold
>chr32_1
AGGAGGUACUACGGCGCGUGCAGGUGCUCGGCGACGCCCUCGCCGAGGAG
CAGCGCCAGACUAAGGUUGCAAUCGACUUACG
....(((.((..(((((.(((...(.((((((((.....)))))))).)))))))))))))).((((((....))))))... (-31.20)

Length sequence

: 82

Length match:

75