chr32_11

cmsearch-Rfam

Family :

mir-346

Id:

RF00758

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00758

Description:

not description

Score:

31.0

E-value:

0.0087

From sequence:

101600

To sequence:

101512

Alignments:

                            v  v     v         v                     v        v     v  v                      NC
                 :::::<<<<<<<<-<<<<--<<<<<----<<<<<<<<-<~~~~~~>>>>>>>>>--->>>>>-->>>>->>>>>->>>:::::::::::::: CS
  RF00758      1 UCUGUGcugGGCguCuGuCUGCCcgaaUGCCuGCCuCUc*[12]*gGaGGCaGGGGCcgGGCcUgCaGCcGCCuGggCAGAGCgGCUCCUgC 98    
                  CUG  :U:G: :   G:   :CC:+ UGC UGC::CU:      :G::GCA G G :GG: CU:C  C: :C:GG: AGAG +G U  UG 
    chr32 101600 GCUGGGUUGGCGCACUGCUGUACCGCGUGCAUGCUGCUG*[ 3]*CGCAGCACGCGAUGGUCCUGCGACGGGCCGGGUAGAGUUGAUUUUGU 101512
                 *********************************999975...6..59999****************************************** PP

RNAfold
>chr32_11
CCGUACAAAAUCAACUCUACCCGGCCCGUCGCAGGACCAUCGCGUGCUGC
GAAGCAGCAGCAUGCACGCGGUACAGCAGUGCGCCAACCCAGCUACCC
.(((((................((.((......)).))...(((((((((......)))))))))..((......)).)))))............... (-27.40)

Length sequence

: 98

Length match:

87