chr32_18

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

42.2

E-value:

0.00024

From sequence:

1363120

To sequence:

1363246

Alignments:

                          v                   v            v                 v           NC
                  <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929       1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuG*[13]*CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77     
                  :G G:G G GUG :UGUGUGUG::UG:GUGUG      CAC C:CA::CACACAC:CAC C C:C C:C+
    chr32 1363120 UGUGUGUGGGUGCUUGUGUGUGUGUGUGUGUG*[64]*CAC-CACACACACACACACACACGCACGCACC 1363246
                  ***************************98887...9..565.89999999******************** PP

>>

RNAfold
>chr32_18
GUGUGUGGGUGCUUGUGUGUGUGUGUGUGUGCCAGUGCGCGGUAUGGUGU
GGUCGUGAGGGGCGUACUCGAACGCUUUCUUCCGCUUUCUUCAUACACCA
CACACACACACACACACGCACGCACC
.......(((((.((((((((((((((((((...(((.(..((((((...((.((.(((((((((......)))))..))))))))....)))))).)))).)))))))))))))))))).))))) (-62.40)

Length sequence

: 126

Length match:

125