chr32_20

cmsearch-Rfam

Family :

mir-787

Id:

RF00896

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00896

Description:

not description

Score:

37.8

E-value:

4.3e-05

From sequence:

763361

To sequence:

763259

Alignments:

                               v                                                       v               NC
                 <<<-<----<-<<<<<<<<<<<<<<<<<<<<-<<<<<<__~~~~~~>>>>>>->>>>>->>>>>>>>>>>>>>>->->->>>::: CS
  RF00896      1 gccguAaauguaGacGaaggauaCuagaCgaUCuuaCaUa*[13]*uGuaaGCucGucUuaGuauccuuCguCuCugaaggcAaU 92    
                 G : :A A G+:G: :AA::A:A::AGAC:: C::AC: +      :GU::G ::GUC U::U:U::UU: :C:CUG:+: C +U
    chr32 763361 GGAAAACAGGGGGAAAAAAAAAAUAAGACAUCCACACGAC*[25]*CGUGUGGAUGUC-UUAUUUUUUUUCCCCCUGUUUUCCUU 763259
                 *************************************975...9..9***********.89************************ PP

RNAfold
>chr32_20
AGGAAAACAGGGGGAAAAAAAAUAAGACAUCCACACGACAGUUUUACCUU
UGAUGCGAAACUGUCGUGUGGAUGUCUUAUUUUUUUUUUCCCCCUGUUUU
CC
.((((((((((((((((((((((((((((((((((((((((((((...........))))))))))))))))))))))))..)))))))))))))))))))) (-70.20)

Length sequence

: 102

Length match:

101